远程服务器上，再次配笔记1、2、11、12相同的深度学习和gcc环境

文章目录

- - - 参考文献
  - 创建环境
  - 在(zgp_m3dm)中安装会显示zgp_m3dm_main环境中的情况满足
  - - (base) ~/zgp/M3DM-repetition conda deactivate
  - 再次安装
  - - 如果服务器本身不能联网，需下载pysocks包以设置反向代理（具体可参考之前的笔记10）：
  - 再次(zgp_m3dm) ~/zgp/M3DM-repetition (master ✔) pip install -r requirement.txt
  - pip install --upgrade https://github.com/unlimblue/KNN_CUDA/releases/download/0.2/KNN_CUDA-0.2-py3-none-any.whl
  - pip install "git+http://github.com/erikwijmans/Pointnet2_PyTorch.git#egg=pointnet2_ops&subdirectory=pointnet2_ops_lib"
  - conda install matplotlib
  - pip install pandas
  - - 报错
- 清理删除上一个环境conda remove --name zgp_m3dm_main --all导致需要再配gcc相关环境
- - 虚拟环境中装gcc conda install -c moussi gcc_impl_linux-64=8.4.0
  - 继续对应装相同版本conda install -c moussi gxx_impl_linux-64=8.4.0
  - - 软连接（没成功）
    - 建立自己的软连接
    - 报错ImportError: /lib64/libstdc++.so.6: version `CXXABI_1.3.9' not found (required by /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages/PIL/../../.././libLerc.so)
    - export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:./home/cszx/miniconda3/envs/zgp_m3dm/lib（不行
    - vim ~/.zshrc（可以）

参考文献

《Multimodal Industrial Anomaly Detection via Hybrid Fusion》论文学习及代码复现
AttributeError: module ‘distutils‘ has no attribute ‘version‘解决跑pytorch代码报错

创建环境

conda create -n zgp_m3dm python=3.8

Package Plan

  environment location: /home/cszx/miniconda3/envs/zgp_m3dm

  added / updated specs:
    - python=3.8


The following NEW packages will be INSTALLED:

  _libgcc_mutex      pkgs/main/linux-64::_libgcc_mutex-0.1-main 
  _openmp_mutex      pkgs/main/linux-64::_openmp_mutex-5.1-1_gnu 
  ca-certificates    pkgs/main/linux-64::ca-certificates-2024.3.11-h06a4308_0 
  ld_impl_linux-64   pkgs/main/linux-64::ld_impl_linux-64-2.38-h1181459_1 
  libffi             pkgs/main/linux-64::libffi-3.4.4-h6a678d5_1 
  libgcc-ng          pkgs/main/linux-64::libgcc-ng-11.2.0-h1234567_1 
  libgomp            pkgs/main/linux-64::libgomp-11.2.0-h1234567_1 
  libstdcxx-ng       pkgs/main/linux-64::libstdcxx-ng-11.2.0-h1234567_1 
  ncurses            pkgs/main/linux-64::ncurses-6.4-h6a678d5_0 
  openssl            pkgs/main/linux-64::openssl-3.0.13-h7f8727e_2 
  pip                pkgs/main/linux-64::pip-24.0-py38h06a4308_0 
  python             pkgs/main/linux-64::python-3.8.19-h955ad1f_0 
  readline           pkgs/main/linux-64::readline-8.2-h5eee18b_0 
  setuptools         pkgs/main/linux-64::setuptools-69.5.1-py38h06a4308_0 
  sqlite             pkgs/main/linux-64::sqlite-3.45.3-h5eee18b_0 
  tk                 pkgs/main/linux-64::tk-8.6.14-h39e8969_0 
  wheel              pkgs/main/linux-64::wheel-0.43.0-py38h06a4308_0 
  xz                 pkgs/main/linux-64::xz-5.4.6-h5eee18b_1 
  zlib               pkgs/main/linux-64::zlib-1.2.13-h5eee18b_1 


Proceed ([y]/n)? y


Downloading and Extracting Packages:

Preparing transaction: done
Verifying transaction: done
Executing transaction: done
#
# To activate this environment, use
#
#     $ conda activate zgp_m3dm
#
# To deactivate an active environment, use
#
#     $ conda deactivate

参考《Multimodal Industrial Anomaly Detection via Hybrid Fusion》论文学习及代码复现发现

(zgp_m3dm) ~/zgp/M3DM-repetition pip install -r requirement.txt
Looking in indexes: https://pypi.tuna.tsinghua.edu.cn/simple
Requirement already satisfied: numpy in /home/cszx/miniconda3/envs/zgp_m3dm_main/lib/python3.8/site-packages (from -r requirement.txt (line 1)) (1.24.4)
Requirement already satisfied: Pillow in /home/cszx/miniconda3/envs/zgp_m3dm_main/lib/python3.8/site-packages (from -r requirement.txt (line 2)) (10.3.0)
Requirement already satisfied: scikit-learn in /home/cszx/miniconda3/envs/zgp_m3dm_main/lib/python3.8/site-packages (from -r requirement.txt (line 3)) (1.3.2)

在(zgp_m3dm)中安装会显示zgp_m3dm_main环境中的情况满足

(zgp_m3dm) ~/zgp/M3DM-repetition conda deactivate

(base) ~/zgp/M3DM-repetition conda deactivate

~/zgp/M3DM-repetition conda activate zgp_m3dm

再次安装

(zgp_m3dm) ~/zgp/M3DM-repetition pip install -r requirement.txt
Looking in indexes: https://pypi.tuna.tsinghua.edu.cn/simple
ERROR: Could not install packages due to an OSError: Missing dependencies for SOCKS support.

WARNING: There was an error checking the latest version of pip.

如果服务器本身不能联网，需下载pysocks包以设置反向代理（具体可参考之前的笔记10）：

首先，在base环境将需要的pysocks包下载下来，

(base) ~ git clone https://gitcode.com/Anorov/PySocks.git
之后进入新虚拟环境中执行安装，

~/PySocks (master ✔) conda activate zgp_shape
(zgp_shape) ~/PySocks (master ✔) python setup.py install

(zgp_m3dm) ~/PySocks (master ✔) python setup.py install
Warning: 'classifiers' should be a list, got type 'tuple'
running install
/home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` directly.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html for details.
        ********************************************************************************

!!
  self.initialize_options()
/home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages/setuptools/_distutils/cmd.py:66: EasyInstallDeprecationWarning: easy_install command is deprecated.
!!

        ********************************************************************************
        Please avoid running ``setup.py`` and ``easy_install``.
        Instead, use pypa/build, pypa/installer or other
        standards-based tools.

        See https://github.com/pypa/setuptools/issues/917 for details.
        ********************************************************************************

!!
  self.initialize_options()
running bdist_egg
running egg_info
writing PySocks.egg-info/PKG-INFO
writing dependency_links to PySocks.egg-info/dependency_links.txt
writing top-level names to PySocks.egg-info/top_level.txt
reading manifest file 'PySocks.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE'
writing manifest file 'PySocks.egg-info/SOURCES.txt'
installing library code to build/bdist.linux-x86_64/egg
running install_lib
running build_py
copying socks.py -> build/lib
copying sockshandler.py -> build/lib
creating build/bdist.linux-x86_64/egg
copying build/lib/socks.py -> build/bdist.linux-x86_64/egg
copying build/lib/sockshandler.py -> build/bdist.linux-x86_64/egg
byte-compiling build/bdist.linux-x86_64/egg/socks.py to socks.cpython-38.pyc
byte-compiling build/bdist.linux-x86_64/egg/sockshandler.py to sockshandler.cpython-38.pyc
creating build/bdist.linux-x86_64/egg/EGG-INFO
copying PySocks.egg-info/PKG-INFO -> build/bdist.linux-x86_64/egg/EGG-INFO
copying PySocks.egg-info/SOURCES.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying PySocks.egg-info/dependency_links.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
copying PySocks.egg-info/top_level.txt -> build/bdist.linux-x86_64/egg/EGG-INFO
zip_safe flag not set; analyzing archive contents...
creating 'dist/PySocks-1.7.1-py3.8.egg' and adding 'build/bdist.linux-x86_64/egg' to it
removing 'build/bdist.linux-x86_64/egg' (and everything under it)
Processing PySocks-1.7.1-py3.8.egg
Copying PySocks-1.7.1-py3.8.egg to /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages
Adding PySocks 1.7.1 to easy-install.pth file

Installed /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages/PySocks-1.7.1-py3.8.egg
Processing dependencies for PySocks==1.7.1
Finished processing dependencies for PySocks==1.7.1

export http_proxy=“socks5h://127.0.0.1:8080”
export https_proxy=“socks5h://127.0.0.1:8080”

再次(zgp_m3dm) ~/zgp/M3DM-repetition (master ✔) pip install -r requirement.txt

Installing collected packages: wget, mpmath, zipp, urllib3, typing-extensions, tqdm, threadpoolctl, tensorboard-data-server, sympy, setuptools, safetensors, pyyaml, pyasn1, protobuf, Pillow, packaging, oauthlib, nvidia-nvtx-cu12, nvidia-nvjitlink-cu12, nvidia-nccl-cu12, nvidia-curand-cu12, nvidia-cufft-cu12, nvidia-cuda-runtime-cu12, nvidia-cuda-nvrtc-cu12, nvidia-cuda-cupti-cu12, nvidia-cublas-cu12, numpy, networkx, MarkupSafe, kornia-rs, joblib, idna, grpcio, fsspec, filelock, charset-normalizer, certifi, cachetools, absl-py, werkzeug, triton, tifffile, scipy, rsa, requests, PyWavelets, pyasn1-modules, opencv-python, nvidia-cusparse-cu12, nvidia-cudnn-cu12, lazy_loader, jinja2, importlib-metadata, imageio, scikit-learn, scikit-image, requests-oauthlib, nvidia-cusolver-cu12, markdown, huggingface_hub, google-auth, torch, google-auth-oauthlib, torchvision, tensorboard, kornia, timm
  Attempting uninstall: setuptools
    Found existing installation: setuptools 69.5.1
    Uninstalling setuptools-69.5.1:
      Successfully uninstalled setuptools-69.5.1
      Successfully installed MarkupSafe-2.1.5 Pillow-10.3.0 PyWavelets-1.4.1 absl-py-2.1.0 cachetools-5.3.3 certifi-2024.2.2 charset-normalizer-3.3.2 filelock-3.14.0 fsspec-2024.5.0 google-auth-2.29.0 google-auth-oauthlib-1.0.0 grpcio-1.64.0 huggingface_hub-0.23.2 idna-3.7 imageio-2.34.1 importlib-metadata-7.1.0 jinja2-3.1.4 joblib-1.4.2 kornia-0.7.2 kornia-rs-0.1.3 lazy_loader-0.4 markdown-3.6 mpmath-1.3.0 networkx-3.1 numpy-1.24.4 nvidia-cublas-cu12-12.1.3.1 nvidia-cuda-cupti-cu12-12.1.105 nvidia-cuda-nvrtc-cu12-12.1.105 nvidia-cuda-runtime-cu12-12.1.105 nvidia-cudnn-cu12-8.9.2.26 nvidia-cufft-cu12-11.0.2.54 nvidia-curand-cu12-10.3.2.106 nvidia-cusolver-cu12-11.4.5.107 nvidia-cusparse-cu12-12.1.0.106 nvidia-nccl-cu12-2.20.5 nvidia-nvjitlink-cu12-12.5.40 nvidia-nvtx-cu12-12.1.105 oauthlib-3.2.2 opencv-python-4.9.0.80 packaging-24.0 protobuf-5.27.0 pyasn1-0.6.0 pyasn1-modules-0.4.0 pyyaml-6.0.1 requests-2.32.2 requests-oauthlib-2.0.0 rsa-4.9 safetensors-0.4.3 scikit-image-0.21.0 scikit-learn-1.3.2 scipy-1.10.1 setuptools-59.5.0 sympy-1.12 tensorboard-2.14.0 tensorboard-data-server-0.7.2 threadpoolctl-3.5.0 tifffile-2023.7.10 timm-1.0.3 torch-2.3.0 torchvision-0.18.0 tqdm-4.66.4 triton-2.3.0 typing-extensions-4.12.0 urllib3-2.2.1 werkzeug-3.0.3 wget-3.2 zipp-3.19.0
    ```
  安装的版本新，降低torch

pip install torch1.10.0+cu113 torchvision0.11.1+cu113 torchaudio --extra-index-url https://download.pytorch.org/whl/cu113 -i https://pypi.tuna.tsinghua.edu.cn/simple

 Collecting torch==1.10.0+cu113
  Using cached https://download.pytorch.org/whl/cu113/torch-1.10.0%2Bcu113-cp38-cp38-linux_x86_64.whl (1821.4 MB)
Collecting torchvision==0.11.1+cu113
  Using cached https://download.pytorch.org/whl/cu113/torchvision-0.11.1%2Bcu113-cp38-cp38-linux_x86_64.whl (24.6 MB)
Collecting torchaudio
  Using cached https://pypi.tuna.tsinghua.edu.cn/packages/d9/b1/91b6dd40186ba718419786d0c1f4e4a0216dde67ed6b114cea85cbaf1317/torchaudio-2.3.0-cp38-cp38-manylinux1_x86_64.whl (3.3 MB)
Requirement already satisfied: typing-extensions in /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages (from torch==1.10.0+cu113) (4.12.0)
Requirement already satisfied: numpy in /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages (from torchvision==0.11.1+cu113) (1.24.4)
Requirement already satisfied: pillow!=8.3.0,>=5.3.0 in /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages (from torchvision==0.11.1+cu113) (10.3.0)
INFO: pip is looking at multiple versions of torchaudio to determine which version is compatible with other requirements. This could take a while.
Installing collected packages: torch, torchvision, torchaudio
  Attempting uninstall: torch
    Found existing installation: torch 2.3.0
    Uninstalling torch-2.3.0:
      Successfully uninstalled torch-2.3.0
  Attempting uninstall: torchvision
    Found existing installation: torchvision 0.18.0
    Uninstalling torchvision-0.18.0:
      Successfully uninstalled torchvision-0.18.0
Successfully installed torch-1.10.0+cu113 torchaudio-0.10.0+cu113 torchvision-0.11.1+cu113

pip install --upgrade https://github.com/unlimblue/KNN_CUDA/releases/download/0.2/KNN_CUDA-0.2-py3-none-any.whl

Collecting KNN-CUDA==0.2
  Downloading https://github.com/unlimblue/KNN_CUDA/releases/download/0.2/KNN_CUDA-0.2-py3-none-any.whl (5.7 kB)
Requirement already satisfied: numpy in /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages (from KNN-CUDA==0.2) (1.24.4)
Requirement already satisfied: scikit-learn in /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages (from KNN-CUDA==0.2) (1.3.2)
Requirement already satisfied: torch>=1.1.0 in /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages (from KNN-CUDA==0.2) (1.10.0+cu113)
Requirement already satisfied: typing-extensions in /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages (from torch>=1.1.0->KNN-CUDA==0.2) (4.12.0)
Requirement already satisfied: scipy>=1.5.0 in /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages (from scikit-learn->KNN-CUDA==0.2) (1.10.1)
Requirement already satisfied: joblib>=1.1.1 in /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages (from scikit-learn->KNN-CUDA==0.2) (1.4.2)
Requirement already satisfied: threadpoolctl>=2.0.0 in /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages (from scikit-learn->KNN-CUDA==0.2) (3.5.0)
Installing collected packages: KNN-CUDA
Successfully installed KNN-CUDA-0.2

pip install “git+http://github.com/erikwijmans/Pointnet2_PyTorch.git#egg=pointnet2_ops&subdirectory=pointnet2_ops_lib”

Requirement already satisfied: torch>=1.4 in /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages (from pointnet2_ops) (1.10.0+cu113)
Requirement already satisfied: typing-extensions in /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages (from torch>=1.4->pointnet2_ops) (4.12.0)
Building wheels for collected packages: pointnet2_ops
  Building wheel for pointnet2_ops (setup.py) ... done
  Created wheel for pointnet2_ops: filename=pointnet2_ops-3.0.0-cp38-cp38-linux_x86_64.whl size=6389382 sha256=ecd25151aee1e80c144aa09de0aa629f6e4912109c7f29a613719a770f74310d
  Stored in directory: /tmp/pip-ephem-wheel-cache-is3ew51v/wheels/81/9b/50/afb7a8c2bd3bde2aad89a6e36f246af0015230a65eca33ae92
Successfully built pointnet2_ops
Installing collected packages: pointnet2_ops
Successfully installed pointnet2_ops-3.0.0

conda install matplotlib

Package Plan

  environment location: /home/cszx/miniconda3/envs/zgp_m3dm

  added / updated specs:
    - matplotlib


The following NEW packages will be INSTALLED:

  blas               pkgs/main/linux-64::blas-1.0-mkl 
  brotli             pkgs/main/linux-64::brotli-1.0.9-h5eee18b_8 
  brotli-bin         pkgs/main/linux-64::brotli-bin-1.0.9-h5eee18b_8 
  bzip2              pkgs/main/linux-64::bzip2-1.0.8-h5eee18b_6 
  contourpy          pkgs/main/linux-64::contourpy-1.0.5-py38hdb19cb5_0 
  cycler             pkgs/main/noarch::cycler-0.11.0-pyhd3eb1b0_0 
  cyrus-sasl         pkgs/main/linux-64::cyrus-sasl-2.1.28-h52b45da_1 
  dbus               pkgs/main/linux-64::dbus-1.13.18-hb2f20db_0 
  expat              pkgs/main/linux-64::expat-2.6.2-h6a678d5_0 
  fontconfig         pkgs/main/linux-64::fontconfig-2.14.1-h4c34cd2_2 
  fonttools          pkgs/main/linux-64::fonttools-4.51.0-py38h5eee18b_0 
  freetype           pkgs/main/linux-64::freetype-2.12.1-h4a9f257_0 
  glib               pkgs/main/linux-64::glib-2.78.4-h6a678d5_0 
  glib-tools         pkgs/main/linux-64::glib-tools-2.78.4-h6a678d5_0 
  gst-plugins-base   pkgs/main/linux-64::gst-plugins-base-1.14.1-h6a678d5_1 
  gstreamer          pkgs/main/linux-64::gstreamer-1.14.1-h5eee18b_1 
  icu                pkgs/main/linux-64::icu-73.1-h6a678d5_0 
  importlib_resourc~ pkgs/main/linux-64::importlib_resources-6.1.1-py38h06a4308_1 
  intel-openmp       pkgs/main/linux-64::intel-openmp-2023.1.0-hdb19cb5_46306 
  jpeg               pkgs/main/linux-64::jpeg-9e-h5eee18b_1 
  kiwisolver         pkgs/main/linux-64::kiwisolver-1.4.4-py38h6a678d5_0 
  krb5               pkgs/main/linux-64::krb5-1.20.1-h143b758_1 
  lcms2              pkgs/main/linux-64::lcms2-2.12-h3be6417_0 
  lerc               pkgs/main/linux-64::lerc-3.0-h295c915_0 
  libbrotlicommon    pkgs/main/linux-64::libbrotlicommon-1.0.9-h5eee18b_8 
  libbrotlidec       pkgs/main/linux-64::libbrotlidec-1.0.9-h5eee18b_8 
  libbrotlienc       pkgs/main/linux-64::libbrotlienc-1.0.9-h5eee18b_8 
  libclang           pkgs/main/linux-64::libclang-14.0.6-default_hc6dbbc7_1 
  libclang13         pkgs/main/linux-64::libclang13-14.0.6-default_he11475f_1 
  libcups            pkgs/main/linux-64::libcups-2.4.2-h2d74bed_1 
  libdeflate         pkgs/main/linux-64::libdeflate-1.17-h5eee18b_1 
  libedit            pkgs/main/linux-64::libedit-3.1.20230828-h5eee18b_0 
  libglib            pkgs/main/linux-64::libglib-2.78.4-hdc74915_0 
  libiconv           pkgs/main/linux-64::libiconv-1.16-h5eee18b_3 
  libllvm14          pkgs/main/linux-64::libllvm14-14.0.6-hdb19cb5_3 
  libpng             pkgs/main/linux-64::libpng-1.6.39-h5eee18b_0 
  libpq              pkgs/main/linux-64::libpq-12.17-hdbd6064_0 
  libtiff            pkgs/main/linux-64::libtiff-4.5.1-h6a678d5_0 
  libuuid            pkgs/main/linux-64::libuuid-1.41.5-h5eee18b_0 
  libwebp-base       pkgs/main/linux-64::libwebp-base-1.3.2-h5eee18b_0 
  libxcb             pkgs/main/linux-64::libxcb-1.15-h7f8727e_0 
  libxkbcommon       pkgs/main/linux-64::libxkbcommon-1.0.1-h5eee18b_1 
  libxml2            pkgs/main/linux-64::libxml2-2.10.4-hfdd30dd_2 
  lz4-c              pkgs/main/linux-64::lz4-c-1.9.4-h6a678d5_1 
  matplotlib         pkgs/main/linux-64::matplotlib-3.7.2-py38h06a4308_0 
  matplotlib-base    pkgs/main/linux-64::matplotlib-base-3.7.2-py38h1128e8f_0 
  mkl                pkgs/main/linux-64::mkl-2023.1.0-h213fc3f_46344 
  mkl-service        pkgs/main/linux-64::mkl-service-2.4.0-py38h5eee18b_1 
  mkl_fft            pkgs/main/linux-64::mkl_fft-1.3.8-py38h5eee18b_0 
  mkl_random         pkgs/main/linux-64::mkl_random-1.2.4-py38hdb19cb5_0 
  mysql              pkgs/main/linux-64::mysql-5.7.24-h721c034_2 
  numpy              pkgs/main/linux-64::numpy-1.24.3-py38hf6e8229_1 
  numpy-base         pkgs/main/linux-64::numpy-base-1.24.3-py38h060ed82_1 
  openjpeg           pkgs/main/linux-64::openjpeg-2.4.0-h3ad879b_0 
  packaging          pkgs/main/linux-64::packaging-23.2-py38h06a4308_0 
  pcre2              pkgs/main/linux-64::pcre2-10.42-hebb0a14_1 
  pillow             pkgs/main/linux-64::pillow-10.3.0-py38h5eee18b_0 
  ply                pkgs/main/linux-64::ply-3.11-py38_0 
  pyparsing          pkgs/main/linux-64::pyparsing-3.0.9-py38h06a4308_0 
  pyqt               pkgs/main/linux-64::pyqt-5.15.10-py38h6a678d5_0 
  pyqt5-sip          pkgs/main/linux-64::pyqt5-sip-12.13.0-py38h5eee18b_0 
  python-dateutil    pkgs/main/linux-64::python-dateutil-2.9.0post0-py38h06a4308_2 
  qt-main            pkgs/main/linux-64::qt-main-5.15.2-h53bd1ea_10 
  setuptools         pkgs/main/linux-64::setuptools-69.5.1-py38h06a4308_0 
  sip                pkgs/main/linux-64::sip-6.7.12-py38h6a678d5_0 
  six                pkgs/main/noarch::six-1.16.0-pyhd3eb1b0_1 
  tbb                pkgs/main/linux-64::tbb-2021.8.0-hdb19cb5_0 
  tomli              pkgs/main/linux-64::tomli-2.0.1-py38h06a4308_0 
  tornado            pkgs/main/linux-64::tornado-6.3.3-py38h5eee18b_0 
  unicodedata2       pkgs/main/linux-64::unicodedata2-15.1.0-py38h5eee18b_0 
  zipp               pkgs/main/linux-64::zipp-3.17.0-py38h06a4308_0 
  zstd               pkgs/main/linux-64::zstd-1.5.5-hc292b87_2 


Proceed ([y]/n)? y


Downloading and Extracting Packages:

Preparing transaction: done
Verifying transaction: done
Executing transaction: done

pip install pandas

Collecting pandas
  Using cached https://pypi.tuna.tsinghua.edu.cn/packages/f8/7f/5b047effafbdd34e52c9e2d7e44f729a0655efafb22198c45cf692cdc157/pandas-2.0.3-cp38-cp38-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (12.4 MB)
Requirement already satisfied: python-dateutil>=2.8.2 in /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages (from pandas) (2.9.0.post0)
Collecting pytz>=2020.1 (from pandas)
  Using cached https://pypi.tuna.tsinghua.edu.cn/packages/9c/3d/a121f284241f08268b21359bd425f7d4825cffc5ac5cd0e1b3d82ffd2b10/pytz-2024.1-py2.py3-none-any.whl (505 kB)
Collecting tzdata>=2022.1 (from pandas)
  Using cached https://pypi.tuna.tsinghua.edu.cn/packages/65/58/f9c9e6be752e9fcb8b6a0ee9fb87e6e7a1f6bcab2cdc73f02bb7ba91ada0/tzdata-2024.1-py2.py3-none-any.whl (345 kB)
Requirement already satisfied: numpy>=1.20.3 in /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages (from pandas) (1.24.3)
Requirement already satisfied: six>=1.5 in /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages (from python-dateutil>=2.8.2->pandas) (1.16.0)
Installing collected packages: pytz, tzdata, pandas
Successfully installed pandas-2.0.3 pytz-2024.1 tzdata-2024.1

(zgp_m3dm) ~/zgp/M3DM-repetition (master ✔) conda list

#
# Name                    Version                   Build  Channel
_libgcc_mutex             0.1                        main  
_openmp_mutex             5.1                       1_gnu  
absl-py                   2.1.0                    pypi_0    pypi
blas                      1.0                         mkl  
brotli                    1.0.9                h5eee18b_8  
brotli-bin                1.0.9                h5eee18b_8  
bzip2                     1.0.8                h5eee18b_6  
ca-certificates           2024.3.11            h06a4308_0  
cachetools                5.3.3                    pypi_0    pypi
certifi                   2024.2.2                 pypi_0    pypi
charset-normalizer        3.3.2                    pypi_0    pypi
contourpy                 1.0.5            py38hdb19cb5_0  
cycler                    0.11.0             pyhd3eb1b0_0  
cyrus-sasl                2.1.28               h52b45da_1  
dbus                      1.13.18              hb2f20db_0  
expat                     2.6.2                h6a678d5_0  
filelock                  3.14.0                   pypi_0    pypi
fontconfig                2.14.1               h4c34cd2_2  
fonttools                 4.51.0           py38h5eee18b_0  
freetype                  2.12.1               h4a9f257_0  
fsspec                    2024.5.0                 pypi_0    pypi
glib                      2.78.4               h6a678d5_0  
glib-tools                2.78.4               h6a678d5_0  
google-auth               2.29.0                   pypi_0    pypi
google-auth-oauthlib      1.0.0                    pypi_0    pypi
grpcio                    1.64.0                   pypi_0    pypi
gst-plugins-base          1.14.1               h6a678d5_1  
gstreamer                 1.14.1               h5eee18b_1  
huggingface-hub           0.23.2                   pypi_0    pypi
icu                       73.1                 h6a678d5_0  
idna                      3.7                      pypi_0    pypi
imageio                   2.34.1                   pypi_0    pypi
importlib-metadata        7.1.0                    pypi_0    pypi
importlib_resources       6.1.1            py38h06a4308_1  
intel-openmp              2023.1.0         hdb19cb5_46306  
jinja2                    3.1.4                    pypi_0    pypi
joblib                    1.4.2                    pypi_0    pypi
jpeg                      9e                   h5eee18b_1  
kiwisolver                1.4.4            py38h6a678d5_0  
knn-cuda                  0.2                      pypi_0    pypi
kornia                    0.7.2                    pypi_0    pypi
kornia-rs                 0.1.3                    pypi_0    pypi
krb5                      1.20.1               h143b758_1  
lazy-loader               0.4                      pypi_0    pypi
lcms2                     2.12                 h3be6417_0  
ld_impl_linux-64          2.38                 h1181459_1  
lerc                      3.0                  h295c915_0  
libbrotlicommon           1.0.9                h5eee18b_8  
libbrotlidec              1.0.9                h5eee18b_8  
libbrotlienc              1.0.9                h5eee18b_8  
libclang                  14.0.6          default_hc6dbbc7_1  
libclang13                14.0.6          default_he11475f_1  
libcups                   2.4.2                h2d74bed_1  
libdeflate                1.17                 h5eee18b_1  
libedit                   3.1.20230828         h5eee18b_0  
libffi                    3.4.4                h6a678d5_1  
libgcc-ng                 11.2.0               h1234567_1  
libglib                   2.78.4               hdc74915_0  
libgomp                   11.2.0               h1234567_1  
libiconv                  1.16                 h5eee18b_3  
libllvm14                 14.0.6               hdb19cb5_3  
libpng                    1.6.39               h5eee18b_0  
libpq                     12.17                hdbd6064_0  
libstdcxx-ng              11.2.0               h1234567_1  
libtiff                   4.5.1                h6a678d5_0  
libuuid                   1.41.5               h5eee18b_0  
libwebp-base              1.3.2                h5eee18b_0  
libxcb                    1.15                 h7f8727e_0  
libxkbcommon              1.0.1                h5eee18b_1  
libxml2                   2.10.4               hfdd30dd_2  
lz4-c                     1.9.4                h6a678d5_1  
markdown                  3.6                      pypi_0    pypi
markupsafe                2.1.5                    pypi_0    pypi
matplotlib                3.7.2            py38h06a4308_0  
matplotlib-base           3.7.2            py38h1128e8f_0  
mkl                       2023.1.0         h213fc3f_46344  
mkl-service               2.4.0            py38h5eee18b_1  
mkl_fft                   1.3.8            py38h5eee18b_0  
mkl_random                1.2.4            py38hdb19cb5_0  
mpmath                    1.3.0                    pypi_0    pypi
mysql                     5.7.24               h721c034_2  
ncurses                   6.4                  h6a678d5_0  
networkx                  3.1                      pypi_0    pypi
numpy                     1.24.4                   pypi_0    pypi
numpy-base                1.24.3           py38h060ed82_1  
nvidia-cublas-cu12        12.1.3.1                 pypi_0    pypi
nvidia-cuda-cupti-cu12    12.1.105                 pypi_0    pypi
nvidia-cuda-nvrtc-cu12    12.1.105                 pypi_0    pypi
nvidia-cuda-runtime-cu12  12.1.105                 pypi_0    pypi
nvidia-cudnn-cu12         8.9.2.26                 pypi_0    pypi
nvidia-cufft-cu12         11.0.2.54                pypi_0    pypi
nvidia-curand-cu12        10.3.2.106               pypi_0    pypi
nvidia-cusolver-cu12      11.4.5.107               pypi_0    pypi
nvidia-cusparse-cu12      12.1.0.106               pypi_0    pypi
nvidia-nccl-cu12          2.20.5                   pypi_0    pypi
nvidia-nvjitlink-cu12     12.5.40                  pypi_0    pypi
nvidia-nvtx-cu12          12.1.105                 pypi_0    pypi
oauthlib                  3.2.2                    pypi_0    pypi
opencv-python             4.9.0.80                 pypi_0    pypi
openjpeg                  2.4.0                h3ad879b_0  
openssl                   3.0.13               h7f8727e_2  
packaging                 24.0                     pypi_0    pypi
pandas                    2.0.3                    pypi_0    pypi
pcre2                     10.42                hebb0a14_1  
pillow                    10.3.0           py38h5eee18b_0  
pip                       24.0             py38h06a4308_0  
ply                       3.11                     py38_0  
pointnet2-ops             3.0.0                    pypi_0    pypi
protobuf                  5.27.0                   pypi_0    pypi
pyasn1                    0.6.0                    pypi_0    pypi
pyasn1-modules            0.4.0                    pypi_0    pypi
pyparsing                 3.0.9            py38h06a4308_0  
pyqt                      5.15.10          py38h6a678d5_0  
pyqt5-sip                 12.13.0          py38h5eee18b_0  
python                    3.8.19               h955ad1f_0  
python-dateutil           2.9.0post0       py38h06a4308_2  
pytz                      2024.1                   pypi_0    pypi
pywavelets                1.4.1                    pypi_0    pypi
pyyaml                    6.0.1                    pypi_0    pypi
qt-main                   5.15.2              h53bd1ea_10  
readline                  8.2                  h5eee18b_0  
requests                  2.32.2                   pypi_0    pypi
requests-oauthlib         2.0.0                    pypi_0    pypi
rsa                       4.9                      pypi_0    pypi
safetensors               0.4.3                    pypi_0    pypi
scikit-image              0.21.0                   pypi_0    pypi
scikit-learn              1.3.2                    pypi_0    pypi
scipy                     1.10.1                   pypi_0    pypi
setuptools                59.5.0                   pypi_0    pypi
sip                       6.7.12           py38h6a678d5_0  
six                       1.16.0             pyhd3eb1b0_1  
sqlite                    3.45.3               h5eee18b_0  
sympy                     1.12                     pypi_0    pypi
tbb                       2021.8.0             hdb19cb5_0  
tensorboard               2.14.0                   pypi_0    pypi
tensorboard-data-server   0.7.2                    pypi_0    pypi
threadpoolctl             3.5.0                    pypi_0    pypi
tifffile                  2023.7.10                pypi_0    pypi
timm                      1.0.3                    pypi_0    pypi
tk                        8.6.14               h39e8969_0  
tomli                     2.0.1            py38h06a4308_0  
torch                     1.10.0+cu113             pypi_0    pypi
torchaudio                0.10.0+cu113             pypi_0    pypi
torchvision               0.11.1+cu113             pypi_0    pypi
tornado                   6.3.3            py38h5eee18b_0  
tqdm                      4.66.4                   pypi_0    pypi
triton                    2.3.0                    pypi_0    pypi
typing-extensions         4.12.0                   pypi_0    pypi
tzdata                    2024.1                   pypi_0    pypi
unicodedata2              15.1.0           py38h5eee18b_0  
urllib3                   2.2.1                    pypi_0    pypi
werkzeug                  3.0.3                    pypi_0    pypi
wget                      3.2                      pypi_0    pypi
wheel                     0.43.0           py38h06a4308_0  
xz                        5.4.6                h5eee18b_1  
zipp                      3.19.0                   pypi_0    pypi
zlib                      1.2.13               h5eee18b_1  
zstd                      1.5.5                hc292b87_2

报错

Traceback (most recent call last):
File “fusion_pretrain.py”, line 11, in
from torch.utils.tensorboard import SummaryWriter
File “/home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages/torch/utils/tensorboard/init.py”, line 4, in
LooseVersion = distutils.version.LooseVersion
AttributeError: module ‘distutils’ has no attribute ‘version’
和修复环境zgp_m3dm_main时报错一样，决定不改环境了，改代码，参考AttributeError: module ‘distutils‘ has no attribute ‘version‘解决跑pytorch代码报错
找到 /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages/torch/utils/tensorboard/init.py
注释掉四行，远程服务器文件

#LooseVersion = distutils.version.LooseVersion

#if not hasattr(tensorboard, '__version__') or LooseVersion(tensorboard.__version__) < LooseVersion('1.15'):
#    raise ImportError('TensorBoard logging requires TensorBoard version 1.15 or above')

del distutils
#del LooseVersion

可以了。

清理删除上一个环境conda remove --name zgp_m3dm_main --all导致需要再配gcc相关环境

~/zgp/M3DM-repetition (master ✔) conda remove --name zgp_m3dm_main --all

Remove all packages in environment /home/cszx/miniconda3/envs/zgp_m3dm_main:


## Package Plan ##

  environment location: /home/cszx/miniconda3/envs/zgp_m3dm_main


The following packages will be REMOVED:

  _libgcc_mutex-0.1-main
  _openmp_mutex-5.1-1_gnu
  _sysroot_linux-64_curr_repodata_hack-3-haa98f57_10
  binutils_impl_linux-64-2.38-h2a08ee3_1
  blas-1.0-mkl
  brotli-1.0.9-h5eee18b_8
  brotli-bin-1.0.9-h5eee18b_8
  bzip2-1.0.8-h5eee18b_6
  ca-certificates-2024.3.11-h06a4308_0
  contourpy-1.0.5-py38hdb19cb5_0
  cudatoolkit-11.3.1-h2bc3f7f_2
  cycler-0.11.0-pyhd3eb1b0_0
  cyrus-sasl-2.1.28-h52b45da_1
  dbus-1.13.18-hb2f20db_0
  expat-2.6.2-h6a678d5_0
  fontconfig-2.14.1-h4c34cd2_2
  fonttools-4.51.0-py38h5eee18b_0
  freetype-2.12.1-h4a9f257_0
  gcc_impl_linux-64-8.4.0-he7ac559_17
  glib-2.78.4-h6a678d5_0
  glib-tools-2.78.4-h6a678d5_0
  gst-plugins-base-1.14.1-h6a678d5_1
  gstreamer-1.14.1-h5eee18b_1
  gxx_impl_linux-64-8.4.0-h9ce2e92_17
  icu-73.1-h6a678d5_0
  importlib_resources-6.1.1-py38h06a4308_1
  intel-openmp-2023.1.0-hdb19cb5_46306
  jpeg-9e-h5eee18b_1
  kernel-headers_linux-64-3.10.0-h57e8cba_10
  kiwisolver-1.4.4-py38h6a678d5_0
  krb5-1.20.1-h143b758_1
  lcms2-2.12-h3be6417_0
  ld_impl_linux-64-2.38-h1181459_1
  lerc-3.0-h295c915_0
  libbrotlicommon-1.0.9-h5eee18b_8
  libbrotlidec-1.0.9-h5eee18b_8
  libbrotlienc-1.0.9-h5eee18b_8
  libclang-14.0.6-default_hc6dbbc7_1
  libclang13-14.0.6-default_he11475f_1
  libcups-2.4.2-h2d74bed_1
  libdeflate-1.17-h5eee18b_1
  libedit-3.1.20230828-h5eee18b_0
  libffi-3.4.4-h6a678d5_0
  libgcc-devel_linux-64-8.4.0-hd257e2f_17
  libgcc-ng-11.2.0-h1234567_1
  libglib-2.78.4-hdc74915_0
  libgomp-11.2.0-h1234567_1
  libiconv-1.16-h5eee18b_3
  libllvm14-14.0.6-hdb19cb5_3
  libpng-1.6.39-h5eee18b_0
  libpq-12.17-hdbd6064_0
  libprotobuf-3.20.3-he621ea3_0
  libstdcxx-devel_linux-64-8.4.0-hf0c5c8d_17
  libstdcxx-ng-11.2.0-h1234567_1
  libtiff-4.5.1-h6a678d5_0
  libuuid-1.41.5-h5eee18b_0
  libwebp-base-1.3.2-h5eee18b_0
  libxcb-1.15-h7f8727e_0
  libxkbcommon-1.0.1-h5eee18b_1
  libxml2-2.10.4-hfdd30dd_2
  lz4-c-1.9.4-h6a678d5_0
  matplotlib-3.7.2-py38h06a4308_0
  matplotlib-base-3.7.2-py38h1128e8f_0
  mkl-2023.1.0-h213fc3f_46344
  mkl-service-2.4.0-py38h5eee18b_1
  mkl_fft-1.3.8-py38h5eee18b_0
  mkl_random-1.2.4-py38hdb19cb5_0
  mysql-5.7.24-h721c034_2
  ncurses-6.4-h6a678d5_0
  numpy-1.24.3-py38hf6e8229_1
  openjpeg-2.4.0-h3ad879b_0
  openssl-3.0.13-h7f8727e_2
  packaging-23.2-py38h06a4308_0
  pcre2-10.42-hebb0a14_1
  pillow-10.3.0-py38h5eee18b_0
  pip-23.3.1-py38h06a4308_0
  ply-3.11-py38_0
  protobuf-3.20.3-py38h6a678d5_0
  pyparsing-3.0.9-py38h06a4308_0
  pyqt-5.15.10-py38h6a678d5_0
  pyqt5-sip-12.13.0-py38h5eee18b_0
  python-3.8.19-h955ad1f_0
  python-dateutil-2.9.0post0-py38h06a4308_2
  qt-main-5.15.2-h53bd1ea_10
  readline-8.2-h5eee18b_0
  setuptools-69.5.1-py38h06a4308_0
  sip-6.7.12-py38h6a678d5_0
  six-1.16.0-pyhd3eb1b0_1
  sqlite-3.41.2-h5eee18b_0
  sysroot_linux-64-2.17-h57e8cba_10
  tbb-2021.8.0-hdb19cb5_0
  tk-8.6.12-h1ccaba5_0
  tomli-2.0.1-py38h06a4308_0
  tornado-6.3.3-py38h5eee18b_0
  unicodedata2-15.1.0-py38h5eee18b_0
  wheel-0.41.2-py38h06a4308_0
  xz-5.4.6-h5eee18b_0
  zipp-3.17.0-py38h06a4308_0
  zlib-1.2.13-h5eee18b_0
  zstd-1.5.5-hc292b87_0


Proceed ([y]/n)? y

Preparing transaction: done
Verifying transaction: done
Executing transaction: done

报错了 File “/home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages/torchvision/init.py”, line 7, in
from torchvision import datasets
File “/home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages/torchvision/datasets/init.py”, line 1, in
from .lsun import LSUN, LSUNClass
File “/home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages/torchvision/datasets/lsun.py”, line 2, in
from PIL import Image
File “/home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages/PIL/Image.py”, line 88, in
from . import _imaging as core
ImportError: /lib64/libstdc++.so.6: version `CXXABI_1.3.9’ not found (required by /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages/PIL/…/…/…/./libLerc.so)

虚拟环境中装gcc conda install -c moussi gcc_impl_linux-64=8.4.0

                                          Total:          12 KB

The following NEW packages will be INSTALLED:

  _sysroot_linux-64~ pkgs/main/noarch::_sysroot_linux-64_curr_repodata_hack-3-haa98f57_10 
  binutils_impl_lin~ pkgs/main/linux-64::binutils_impl_linux-64-2.38-h2a08ee3_1 
  gcc_impl_linux-64  pkgs/main/linux-64::gcc_impl_linux-64-8.4.0-he7ac559_17 
  kernel-headers_li~ pkgs/main/noarch::kernel-headers_linux-64-3.10.0-h57e8cba_10 
  libgcc-devel_linu~ pkgs/main/linux-64::libgcc-devel_linux-64-8.4.0-hd257e2f_17 
  sysroot_linux-64   pkgs/main/noarch::sysroot_linux-64-2.17-h57e8cba_10 


Proceed ([y]/n)? y


Downloading and Extracting Packages:
                                                                                                                                                                                                                                        
Preparing transaction: done
Verifying transaction: done
Executing transaction: done

继续对应装相同版本conda install -c moussi gxx_impl_linux-64=8.4.0

The following NEW packages will be INSTALLED:

  gxx_impl_linux-64  pkgs/main/linux-64::gxx_impl_linux-64-8.4.0-h9ce2e92_17 
  libstdcxx-devel_l~ pkgs/main/linux-64::libstdcxx-devel_linux-64-8.4.0-hf0c5c8d_17 


Proceed ([y]/n)? y


Downloading and Extracting Packages:

Preparing transaction: done
Verifying transaction: done
Executing transaction: done

软连接（没成功）

ImportError: /lib64/libstdc++.so.6: version CXXABI_1.3.9' not found (required by /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages/PIL/../../.././libLerc.so) (zgp_m3dm) ~/zgp/M3DM-repetition (master ✔) bin=/home/cszx/miniconda3/envs/zgp_m3dm/bin`
(zgp_m3dm) ~/zgp/M3DM-repetition (master ✔) sudo ln -s ${bin}/x86_64-conda-linux-gnu-cc ${bin}/gcc
[sudo] password for cszx:
ln: failed to create symbolic link ‘/gcc’: File exists
sudo unlink /gcc
(zgp_m3dm) ~/zgp/M3DM-repetition (master ✔) sudo ln -s ${bin}/x86_64-conda-linux-gnu-cc ${bin}/gcc
暂停，也许有创建过，不需要了

建立自己的软连接

ln -s /home/cszx/miniconda3/envs/zgp_m3dm/bin/x86_64-conda-linux-gnu-cc /home/cszx/miniconda3/envs/zgp_m3dm/bin/gcc
ln -s /home/cszx/miniconda3/envs/zgp_m3dm/bin/x86_64-conda-linux-gnu-c++ /home/cszx/miniconda3/envs/zgp_m3dm/bin/g++
重设置环境变量
(zgp_m3dm) ~ export CC=/home/cszx/miniconda3/envs/zgp_m3dm/bin/gcc
(zgp_m3dm) ~ export CXX=/home/cszx/miniconda3/envs/zgp_m3dm/bin/g++

报错ImportError: /lib64/libstdc++.so.6: version `CXXABI_1.3.9’ not found (required by /home/cszx/miniconda3/envs/zgp_m3dm/lib/python3.8/site-packages/PIL/…/…/…/./libLerc.so)

strings /usr/lib64/libstdc++.so.6 | grep GLIBCXX
GLIBCXX_3.4
GLIBCXX_3.4.1
GLIBCXX_3.4.2
GLIBCXX_3.4.3
GLIBCXX_3.4.4
GLIBCXX_3.4.5
GLIBCXX_3.4.6
GLIBCXX_3.4.7
GLIBCXX_3.4.8
GLIBCXX_3.4.9
GLIBCXX_3.4.10
GLIBCXX_3.4.11
GLIBCXX_3.4.12
GLIBCXX_3.4.13
GLIBCXX_3.4.14
GLIBCXX_3.4.15
GLIBCXX_3.4.16
GLIBCXX_3.4.17
GLIBCXX_3.4.18
GLIBCXX_3.4.19
GLIBCXX_DEBUG_MESSAGE_LENGTH

export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:./home/cszx/miniconda3/envs/zgp_m3dm/lib（不行

vim ~/.zshrc（可以）

zgp_m3dm_main改为zgp_m3dm
（按 x 会删除光标下的单个字符）
export CC=/home/cszx/miniconda3/envs/zgp_m3dm/bin/gcc
export CXX=/home/cszx/miniconda3/envs/zgp_m3dm/bin/g++
export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/home/cszx/miniconda3/envs/zgp_m3dm/lib
export PATH=/home/cszx/miniconda3/envs/zgp_m3dm/bin:/home/cszx/miniconda3/envs/zgp_m3dm/lib:$PATH
export PATH=/home/cszx/utils/gcc/bin:$PATH
source ~/.zsh/zsh-autosuggestions/zsh-autosuggestions.zsh
export CUDA_HOME=/usr/local/cuda-11.3
export http_proxy="socks5h://127.0.0.1:8080"
export https_proxy="socks5h://127.0.0.1:8080"

在这里插入图片描述
source ~/.zshrc
可以了